STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM77354.1Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. (138 aa)    
Predicted Functional Partners:
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family.
  
   
 0.782
SHM52887.1
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
  
     0.763
SHM77327.1
FeS assembly SUF system protein.
  
    0.737
SHM77265.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.729
SHM77297.1
Cysteine desulfuration protein SufE.
       0.729
SHM77240.1
Fe-S cluster assembly protein SufD.
       0.727
SHM32218.1
Bacillithiol system protein YtxJ.
  
   
 0.718
SHM35913.1
Thioredoxin reductase (NADPH).
  
     0.711
SHN25756.1
Bacillithiol biosynthesis deacetylase BshB1.
  
     0.670
SHN12227.1
DinB superfamily protein.
  
     0.669
Your Current Organism:
Cyclobacterium lianum
NCBI taxonomy Id: 388280
Other names: C. lianum, CGMCC 1.6102, Cyclobacterium lianum Ying et al. 2006, JCM 14011, strain HY9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.