Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM83910.1 | SHM83929.1 | SAMN04488057_10423 | SAMN04488057_10424 | Kef-type K+ transport system, membrane component KefB. | Uncharacterized conserved protein YafD, endonuclease/exonuclease/phosphatase (EEP) superfamily. | 0.467 |
SHM83910.1 | SHN12562.1 | SAMN04488057_10423 | SAMN04488057_10795 | Kef-type K+ transport system, membrane component KefB. | Predicted Kef-type K+ transport protein, K+/H+ antiporter domain; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.466 |
SHM83929.1 | SHM83910.1 | SAMN04488057_10424 | SAMN04488057_10423 | Uncharacterized conserved protein YafD, endonuclease/exonuclease/phosphatase (EEP) superfamily. | Kef-type K+ transport system, membrane component KefB. | 0.467 |
SHN12562.1 | SHM83910.1 | SAMN04488057_10795 | SAMN04488057_10423 | Predicted Kef-type K+ transport protein, K+/H+ antiporter domain; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Kef-type K+ transport system, membrane component KefB. | 0.466 |