Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM30943.1 | SHN03887.1 | SAMN04488057_10124 | SAMN04488057_105378 | GxxExxY protein. | REP element-mobilizing transposase RayT. | 0.414 |
SHM55402.1 | SHN03887.1 | SAMN04488057_102125 | SAMN04488057_105378 | Putative endonuclease. | REP element-mobilizing transposase RayT. | 0.412 |
SHN03887.1 | SHM30943.1 | SAMN04488057_105378 | SAMN04488057_10124 | REP element-mobilizing transposase RayT. | GxxExxY protein. | 0.414 |
SHN03887.1 | SHM55402.1 | SAMN04488057_105378 | SAMN04488057_102125 | REP element-mobilizing transposase RayT. | Putative endonuclease. | 0.412 |
SHN03887.1 | SHN03903.1 | SAMN04488057_105378 | SAMN04488057_105379 | REP element-mobilizing transposase RayT. | Hypothetical protein. | 0.430 |
SHN03903.1 | SHN03887.1 | SAMN04488057_105379 | SAMN04488057_105378 | Hypothetical protein. | REP element-mobilizing transposase RayT. | 0.430 |