Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KTU01_08860 | KTU01_16870 | GCA_001580365_03407 | GCA_001580365_02185 | Unannotated protein. | Unannotated protein; Belongs to the ParB family. | 0.863 |
KTU01_08860 | KTU01_21420 | GCA_001580365_03407 | GCA_001580365_00025 | Unannotated protein. | Unannotated protein. | 0.535 |
KTU01_08860 | dnaA | GCA_001580365_03407 | GCA_001580365_02177 | Unannotated protein. | Unannotated protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.662 |
KTU01_16870 | KTU01_08860 | GCA_001580365_02185 | GCA_001580365_03407 | Unannotated protein; Belongs to the ParB family. | Unannotated protein. | 0.863 |
KTU01_16870 | KTU01_21420 | GCA_001580365_02185 | GCA_001580365_00025 | Unannotated protein; Belongs to the ParB family. | Unannotated protein. | 0.927 |
KTU01_16870 | KTU01_36550 | GCA_001580365_02185 | GCA_001580365_03474 | Unannotated protein; Belongs to the ParB family. | Unannotated protein. | 0.856 |
KTU01_16870 | dnaA | GCA_001580365_02185 | GCA_001580365_02177 | Unannotated protein; Belongs to the ParB family. | Unannotated protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.730 |
KTU01_21380 | KTU01_21390 | GCA_001580365_00029 | GCA_001580365_00028 | Unannotated protein. | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | 0.838 |
KTU01_21380 | KTU01_21400 | GCA_001580365_00029 | GCA_001580365_00027 | Unannotated protein. | Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.823 |
KTU01_21380 | KTU01_21410 | GCA_001580365_00029 | GCA_001580365_00026 | Unannotated protein. | Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.817 |
KTU01_21380 | KTU01_21420 | GCA_001580365_00029 | GCA_001580365_00025 | Unannotated protein. | Unannotated protein. | 0.778 |
KTU01_21380 | cmk | GCA_001580365_00029 | GCA_001580365_00030 | Unannotated protein. | Unannotated protein. | 0.978 |
KTU01_21380 | der | GCA_001580365_00029 | GCA_001580365_00031 | Unannotated protein. | Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.723 |
KTU01_21390 | KTU01_21380 | GCA_001580365_00028 | GCA_001580365_00029 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein. | 0.838 |
KTU01_21390 | KTU01_21400 | GCA_001580365_00028 | GCA_001580365_00027 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.971 |
KTU01_21390 | KTU01_21410 | GCA_001580365_00028 | GCA_001580365_00026 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.915 |
KTU01_21390 | KTU01_21420 | GCA_001580365_00028 | GCA_001580365_00025 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein. | 0.789 |
KTU01_21390 | cmk | GCA_001580365_00028 | GCA_001580365_00030 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein. | 0.994 |
KTU01_21390 | der | GCA_001580365_00028 | GCA_001580365_00031 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.971 |
KTU01_21400 | KTU01_21380 | GCA_001580365_00027 | GCA_001580365_00029 | Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Unannotated protein. | 0.823 |
page 1 of 3