STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTU01_24950Unannotated protein. (471 aa)    
Predicted Functional Partners:
KTU01_08000
Unannotated protein.
 
  0.871
KTU01_27250
Unannotated protein.
 
  0.870
KTU01_24960
Unannotated protein.
       0.740
KTU01_21280
Unannotated protein.
  
 
   0.684
ribB
Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
  
 
  0.665
KTU01_24930
Unannotated protein.
    
  0.663
KTU01_24940
Unannotated protein.
       0.628
KTU01_27240
Unannotated protein.
 
 
   0.599
KTU01_27230
Unannotated protein.
 
 
   0.582
KTU01_01540
Unannotated protein.
 
 
 0.547
Your Current Organism:
Kocuria turfanensis
NCBI taxonomy Id: 388357
Other names: CCTCC AB 206107, JCM 15622, K. turfanensis, KCTC 19307, Kocuria sp. HO-9042, Kocuria turfanensis Zhou et al. 2008 emend. Camacho et al. 2017, strain HO-9042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.