STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTU01_24850Unannotated protein. (227 aa)    
Predicted Functional Partners:
trkA
Unannotated protein.
 
  
 0.967
KTU01_24830
Unannotated protein.
 
     0.866
KTU01_10020
Unannotated protein.
  
 
 0.745
KTU01_10010
Unannotated protein.
  
 
 0.745
KTU01_24820
Unannotated protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
 
     0.696
KTU01_24670
Unannotated protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
   0.535
acnA
Unannotated protein.
       0.511
KTU01_15020
Unannotated protein.
   
    0.431
Your Current Organism:
Kocuria turfanensis
NCBI taxonomy Id: 388357
Other names: CCTCC AB 206107, JCM 15622, K. turfanensis, KCTC 19307, Kocuria sp. HO-9042, Kocuria turfanensis Zhou et al. 2008 emend. Camacho et al. 2017, strain HO-9042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.