STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTU01_15410Unannotated protein; Belongs to the DapA family. (299 aa)    
Predicted Functional Partners:
dapB
Unannotated protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.961
asd
Unannotated protein; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 
 0.950
thrA
Unannotated protein.
  
 
 0.853
dapA_1
Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
  
 
0.798
KTU01_26250
Unannotated protein; Belongs to the DapA family.
  
  
  0.792
dapA_2
Unannotated protein; Belongs to the DapA family.
  
  
 
0.779
KTU01_26270
Unannotated protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
    
  0.683
KTU01_06680
Unannotated protein; Belongs to the aspartokinase family.
 
 
 0.633
KTU01_29800
Unannotated protein.
    
  0.608
KTU01_09530
Unannotated protein.
   
 
  0.585
Your Current Organism:
Kocuria turfanensis
NCBI taxonomy Id: 388357
Other names: CCTCC AB 206107, JCM 15622, K. turfanensis, KCTC 19307, Kocuria sp. HO-9042, Kocuria turfanensis Zhou et al. 2008 emend. Camacho et al. 2017, strain HO-9042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.