STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTU01_00050Unannotated protein. (336 aa)    
Predicted Functional Partners:
KTU01_00060
Unannotated protein.
 
     0.940
KTU01_09100
Unannotated protein.
  
 
   0.848
KTU01_00080
Unannotated protein.
 
     0.774
KTU01_19200
Unannotated protein.
 
 
 0.763
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
       0.751
secY
Unannotated protein; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
   
   0.720
KTU01_02840
Unannotated protein.
  
     0.712
KTU01_10900
Unannotated protein; May play a role in the intracellular transport of hydrophobic ligands.
  
     0.679
KTU01_35060
Unannotated protein.
  
 
   0.655
KTU01_24940
Unannotated protein.
  
     0.650
Your Current Organism:
Kocuria turfanensis
NCBI taxonomy Id: 388357
Other names: CCTCC AB 206107, JCM 15622, K. turfanensis, KCTC 19307, Kocuria sp. HO-9042, Kocuria turfanensis Zhou et al. 2008 emend. Camacho et al. 2017, strain HO-9042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.