Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTQ66904.1 | flgK | LAX5112_01136 | LAX5112_04083 | Type IV/VI secretion system protein, DotU family. | Flagellar hook-associated protein 1. | 0.746 |
CTQ66904.1 | fliF_1 | LAX5112_01136 | LAX5112_04090 | Type IV/VI secretion system protein, DotU family. | Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.686 |
CTQ66904.1 | fliG_1 | LAX5112_01136 | LAX5112_00184 | Type IV/VI secretion system protein, DotU family. | Flagellar motor switch protein FliG. | 0.604 |
CTQ66904.1 | fliM_1 | LAX5112_01136 | LAX5112_00187 | Type IV/VI secretion system protein, DotU family. | Flagellar motor switch protein FliM. | 0.479 |
CTQ66904.1 | lafU | LAX5112_01136 | LAX5112_04088 | Type IV/VI secretion system protein, DotU family. | Chemotaxis protein LafU. | 0.416 |
CTQ66904.1 | motA | LAX5112_01136 | LAX5112_00188 | Type IV/VI secretion system protein, DotU family. | Chemotaxis protein MotA. | 0.989 |
flgH_2 | flgK | LAX5112_04094 | LAX5112_04083 | Basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | Flagellar hook-associated protein 1. | 0.976 |
flgH_2 | fliF_1 | LAX5112_04094 | LAX5112_04090 | Basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.995 |
flgH_2 | fliG_1 | LAX5112_04094 | LAX5112_00184 | Basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | Flagellar motor switch protein FliG. | 0.958 |
flgH_2 | fliM_1 | LAX5112_04094 | LAX5112_00187 | Basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | Flagellar motor switch protein FliM. | 0.944 |
flgH_2 | fliN_1 | LAX5112_04094 | LAX5112_00185 | Basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. | 0.956 |
flgH_2 | lafU | LAX5112_04094 | LAX5112_04088 | Basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | Chemotaxis protein LafU. | 0.873 |
flgH_2 | motA | LAX5112_04094 | LAX5112_00188 | Basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | Chemotaxis protein MotA. | 0.985 |
flgH_2 | motB | LAX5112_04094 | LAX5112_03111 | Basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | Chemotaxis protein MotB. | 0.616 |
flgH_2 | yiaD | LAX5112_04094 | LAX5112_03168 | Basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | Inner membrane lipoprotein YiaD precursor. | 0.471 |
flgK | CTQ66904.1 | LAX5112_04083 | LAX5112_01136 | Flagellar hook-associated protein 1. | Type IV/VI secretion system protein, DotU family. | 0.746 |
flgK | flgH_2 | LAX5112_04083 | LAX5112_04094 | Flagellar hook-associated protein 1. | Basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.976 |
flgK | fliF_1 | LAX5112_04083 | LAX5112_04090 | Flagellar hook-associated protein 1. | Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.986 |
flgK | fliG_1 | LAX5112_04083 | LAX5112_00184 | Flagellar hook-associated protein 1. | Flagellar motor switch protein FliG. | 0.977 |
flgK | fliM_1 | LAX5112_04083 | LAX5112_00187 | Flagellar hook-associated protein 1. | Flagellar motor switch protein FliM. | 0.946 |
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