Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTQ64783.1 | CTQ64822.1 | LAX5112_00401 | LAX5112_00414 | Hypothetical protein; Belongs to the UPF0178 family. | Tricarballylate dehydrogenase. | 0.512 |
CTQ64822.1 | CTQ64783.1 | LAX5112_00414 | LAX5112_00401 | Tricarballylate dehydrogenase. | Hypothetical protein; Belongs to the UPF0178 family. | 0.512 |
CTQ64822.1 | CTQ64824.1 | LAX5112_00414 | LAX5112_00415 | Tricarballylate dehydrogenase. | Non-canonical purine NTP pyrophosphatase. | 0.572 |
CTQ64822.1 | ccpA_1 | LAX5112_00414 | LAX5112_00413 | Tricarballylate dehydrogenase. | Glucose-resistance amylase regulator. | 0.532 |
CTQ64822.1 | gsk | LAX5112_00414 | LAX5112_02812 | Tricarballylate dehydrogenase. | Inosine-guanosine kinase. | 0.693 |
CTQ64822.1 | nsrR_1 | LAX5112_00414 | LAX5112_00412 | Tricarballylate dehydrogenase. | HTH-type transcriptional repressor NsrR. | 0.484 |
CTQ64824.1 | CTQ64822.1 | LAX5112_00415 | LAX5112_00414 | Non-canonical purine NTP pyrophosphatase. | Tricarballylate dehydrogenase. | 0.572 |
ccpA_1 | CTQ64822.1 | LAX5112_00413 | LAX5112_00414 | Glucose-resistance amylase regulator. | Tricarballylate dehydrogenase. | 0.532 |
ccpA_1 | nsrR_1 | LAX5112_00413 | LAX5112_00412 | Glucose-resistance amylase regulator. | HTH-type transcriptional repressor NsrR. | 0.495 |
gsk | CTQ64822.1 | LAX5112_02812 | LAX5112_00414 | Inosine-guanosine kinase. | Tricarballylate dehydrogenase. | 0.693 |
nsrR_1 | CTQ64822.1 | LAX5112_00412 | LAX5112_00414 | HTH-type transcriptional repressor NsrR. | Tricarballylate dehydrogenase. | 0.484 |
nsrR_1 | ccpA_1 | LAX5112_00412 | LAX5112_00413 | HTH-type transcriptional repressor NsrR. | Glucose-resistance amylase regulator. | 0.495 |