STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araQ_2L-arabinose transport system permease protein AraQ. (279 aa)    
Predicted Functional Partners:
msmE_2
Multiple sugar-binding protein precursor.
 
 0.998
lacF_2
Lactose transport system permease protein LacF.
 
 0.987
malK_2
Maltose/maltodextrin import ATP-binding protein MalK; Belongs to the ABC transporter superfamily.
 
 0.979
iolG
Inositol 2-dehydrogenase.
 
     0.941
ugpA_2
Sn-glycerol-3-phosphate transport system permease protein UgpA.
 0.917
lacF_1
Lactose transport system permease protein LacF.
 0.906
lacF_4
Lactose transport system permease protein LacF.
 0.896
msmE_1
Multiple sugar-binding protein precursor.
  
 0.884
lacF_3
Lactose transport system permease protein LacF.
 0.871
malK_1
Maltose/maltodextrin import ATP-binding protein MalK; Belongs to the ABC transporter superfamily.
 
 0.860
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.