STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaB1,2-phenylacetyl-CoA monooxygenase, subunit B. (95 aa)    
Predicted Functional Partners:
paaA_1
1,2-phenylacetyl-CoA epoxidase, subunit A.
 
 0.999
paaE
1,2-phenylacetyl-CoA epoxidase, subunit E.
 
 
 0.999
paaD
1,2-phenylacetyl-CoA monooxygenase, subunit D.
 
 
 0.999
paaC
1,2-phenylacetyl-CoA monooxygenase, subunit C.
 
 0.999
paaA_2
1,2-phenylacetyl-CoA epoxidase, subunit A.
 
 0.999
paaI
Acyl-coenzyme A thioesterase PaaI.
 
 
 0.981
paaK
Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.963
paaZ_1
Bifunctional protein PaaZ.
 
  
 0.962
paaG_1
1,2-epoxyphenylacetyl-CoA isomerase.
 
 
 0.923
hmp
3-ketosteroid-9-alpha-hydroxylase reductase subunit.
  
 
 0.897
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.