STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ66199.1Hypothetical protein. (393 aa)    
Predicted Functional Partners:
stp_1
Serine/threonine phosphatase stp.
   
  
 0.814
CTQ67043.1
Hypothetical protein.
 
    0.791
CTQ67050.1
Hypothetical protein.
 
     0.778
CTQ67037.1
Transcriptional regulator PhoU.
 
    0.776
lysX_2
Alpha-aminoadipate--LysW ligase LysX.
 
   
 0.750
CTQ67048.1
Hypothetical protein.
 
     0.731
CTQ67046.1
Phosphoglyceromutase.
 
     0.724
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
       0.689
CTQ66202.1
Stress responsive A/B Barrel Domain protein.
       0.550
ttuD
Putative hydroxypyruvate reductase.
       0.510
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.