STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ66800.1Putative protein with a bacterial SH3 domain homologue. (886 aa)    
Predicted Functional Partners:
engB
Putative GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
   
    0.775
hlyA_1
Hemolysin, chromosomal.
  
     0.730
CTQ67197.1
LexA repressor; Belongs to the peptidase S24 family.
  
     0.719
CTQ74224.1
Hypothetical protein.
  
     0.712
CTQ72537.1
Hypothetical protein.
  
     0.703
CTQ67215.1
RecT family protein.
  
     0.694
CTQ74088.1
Hypothetical protein.
  
     0.678
CTQ73691.1
Hypothetical protein.
  
     0.675
CTQ74266.1
Hypothetical protein.
 
     0.672
CTQ75013.1
Flagellar hook-length control protein FliK.
  
    0.660
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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