STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ67216.1Hypothetical protein. (210 aa)    
Predicted Functional Partners:
recE
Exodeoxyribonuclease 8.
 
     0.821
CTQ67220.1
Polynucleotide kinase.
 
     0.818
CTQ67215.1
RecT family protein.
       0.805
CTQ67222.1
Hypothetical protein.
  
    0.794
CTQ67218.1
Exonuclease.
       0.782
CTQ67209.1
Hypothetical protein.
       0.773
CTQ67211.1
Hypothetical protein.
       0.773
CTQ67224.1
Hypothetical protein.
       0.494
CTQ67225.1
Hypothetical protein.
       0.438
CTQ67227.1
Hypothetical protein.
       0.428
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.