STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ67337.1Putative ABC transporter-binding protein precursor. (628 aa)    
Predicted Functional Partners:
nikB_1
Nickel transport system permease protein NikB.
 
 0.932
dppC_1
Dipeptide transport system permease protein DppC.
 
 0.921
gsiA_1
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
 
 0.894
dppC_2
Dipeptide transport system permease protein DppC.
 
 0.833
CTQ67345.1
S-adenosyl-L-methionine methyltransferase.
 
     0.827
nikB_2
Nickel transport system permease protein NikB.
 
 0.810
CTQ67294.1
Putative ABC transporter ATP-binding protein.
  
  
 0.797
CTQ67296.1
Putative glycosyl transferase.
  
     0.771
mshA_2
D-inositol 3-phosphate glycosyltransferase.
  
     0.770
CTQ67302.1
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase.
  
     0.770
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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