STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ67563.1Arylsulfatase. (500 aa)    
Predicted Functional Partners:
phnX
Phosphonoacetaldehyde hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family.
 
     0.854
pkn1_2
Serine/threonine-protein kinase pkn1.
 
 
   0.826
ydeM
Hypothetical protein; Anaerobic sulfatase-maturating enzyme homolog YdeM.
 
 
 0.766
phnW
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
 
     0.748
atsA_2
Arylsulfatase precursor.
 
   
 0.697
atsA_5
Arylsulfatase precursor.
  
     0.695
atsA_6
Arylsulfatase precursor.
  
     0.619
atsA_3
Arylsulfatase.
 
   
 0.594
uidA
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
 0.579
CTQ67566.1
V8-like Glu-specific endopeptidase.
       0.528
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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