STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yxeM_1Putative amino-acid-binding protein YxeM precursor. (263 aa)    
Predicted Functional Partners:
CTQ67234.1
Bacterial extracellular solute-binding proteins, family 3.
  
     0.747
CTQ77619.1
Bacterial extracellular solute-binding proteins, family 3.
  
     0.740
fliY_2
Sulfate starvation-induced protein 7.
  
     0.737
CTQ64305.1
Bacterial extracellular solute-binding proteins, family 3.
  
     0.682
CTQ66461.1
Bacterial extracellular solute-binding proteins, family 3.
  
     0.668
CTQ73375.1
Bacterial extracellular solute-binding proteins, family 3.
  
     0.663
yxeM_3
Putative amino-acid-binding protein YxeM precursor.
  
     0.650
CTQ66466.1
Cystine transporter subunit.
  
     0.621
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
 0.620
CTQ64006.1
Hypothetical protein.
  
     0.605
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.