STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ68689.1Cytoplasmic glycerophosphodiester phosphodiesterase. (253 aa)    
Predicted Functional Partners:
CTQ68687.1
Hypothetical protein.
       0.813
ytpA
Phospholipase YtpA.
 
  
 0.796
glpQ
Glycerophosphoryl diester phosphodiesterase precursor.
     
 0.783
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.732
aqpZ
Bacterial nodulin-like intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.716
CTQ68691.1
Putative endoribonuclease L-PSP.
       0.680
CTQ69451.1
PhoD-like phosphatase.
  
 
 0.512
CTQ68698.1
Hypothetical protein.
  
     0.509
CTQ73167.1
Putative phosphatase.
  
 
 0.491
glpD
Aerobic glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.480
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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