Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTQ69114.1 | ispG | LAX5112_01988 | LAX5112_01990 | Hypothetical protein. | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.709 |
CTQ69114.1 | nucA | LAX5112_01988 | LAX5112_01987 | Hypothetical protein. | Nuclease precursor. | 0.497 |
CTQ69114.1 | pdxY | LAX5112_01988 | LAX5112_01989 | Hypothetical protein. | Pyridoxamine kinase; Belongs to the pyridoxine kinase family. | 0.929 |
hoxF | nqo1_1 | LAX5112_00895 | LAX5112_03485 | NAD-reducing hydrogenase HoxS subunit alpha. | NADH-quinone oxidoreductase chain 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.993 |
hoxF | nqo1_2 | LAX5112_00895 | LAX5112_03624 | NAD-reducing hydrogenase HoxS subunit alpha. | NADH-quinone oxidoreductase subunit 1. | 0.999 |
hoxF | nucA | LAX5112_00895 | LAX5112_01987 | NAD-reducing hydrogenase HoxS subunit alpha. | Nuclease precursor. | 0.848 |
ispG | CTQ69114.1 | LAX5112_01990 | LAX5112_01988 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | Hypothetical protein. | 0.709 |
ispG | nucA | LAX5112_01990 | LAX5112_01987 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | Nuclease precursor. | 0.431 |
ispG | pdxY | LAX5112_01990 | LAX5112_01989 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | Pyridoxamine kinase; Belongs to the pyridoxine kinase family. | 0.704 |
nqo1_1 | hoxF | LAX5112_03485 | LAX5112_00895 | NADH-quinone oxidoreductase chain 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | NAD-reducing hydrogenase HoxS subunit alpha. | 0.993 |
nqo1_1 | nqo1_2 | LAX5112_03485 | LAX5112_03624 | NADH-quinone oxidoreductase chain 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | NADH-quinone oxidoreductase subunit 1. | 0.993 |
nqo1_1 | nucA | LAX5112_03485 | LAX5112_01987 | NADH-quinone oxidoreductase chain 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Nuclease precursor. | 0.758 |
nqo1_2 | hoxF | LAX5112_03624 | LAX5112_00895 | NADH-quinone oxidoreductase subunit 1. | NAD-reducing hydrogenase HoxS subunit alpha. | 0.999 |
nqo1_2 | nqo1_1 | LAX5112_03624 | LAX5112_03485 | NADH-quinone oxidoreductase subunit 1. | NADH-quinone oxidoreductase chain 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.993 |
nqo1_2 | nucA | LAX5112_03624 | LAX5112_01987 | NADH-quinone oxidoreductase subunit 1. | Nuclease precursor. | 0.848 |
nucA | CTQ69114.1 | LAX5112_01987 | LAX5112_01988 | Nuclease precursor. | Hypothetical protein. | 0.497 |
nucA | hoxF | LAX5112_01987 | LAX5112_00895 | Nuclease precursor. | NAD-reducing hydrogenase HoxS subunit alpha. | 0.848 |
nucA | ispG | LAX5112_01987 | LAX5112_01990 | Nuclease precursor. | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.431 |
nucA | nqo1_1 | LAX5112_01987 | LAX5112_03485 | Nuclease precursor. | NADH-quinone oxidoreductase chain 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.758 |
nucA | nqo1_2 | LAX5112_01987 | LAX5112_03624 | Nuclease precursor. | NADH-quinone oxidoreductase subunit 1. | 0.848 |
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