Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTQ69447.1 | dctP_5 | LAX5112_02117 | LAX5112_02116 | Hypothetical protein. | C4-dicarboxylate-binding periplasmic protein precursor. | 0.639 |
CTQ69447.1 | degA_1 | LAX5112_02117 | LAX5112_02118 | Hypothetical protein. | Degradation activator. | 0.523 |
CTQ69447.1 | gno | LAX5112_02117 | LAX5112_02112 | Hypothetical protein. | Gluconate 5-dehydrogenase. | 0.421 |
CTQ69447.1 | hpsN | LAX5112_02117 | LAX5112_02113 | Hypothetical protein. | Sulfopropanediol 3-dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.421 |
CTQ69447.1 | siaT_15 | LAX5112_02117 | LAX5112_02114 | Hypothetical protein. | Neu5Ac permease. | 0.421 |
CTQ69447.1 | siaT_16 | LAX5112_02117 | LAX5112_02115 | Hypothetical protein. | Neu5Ac permease. | 0.424 |
CTQ69447.1 | suyA | LAX5112_02117 | LAX5112_02110 | Hypothetical protein. | (2R)-sulfolactate sulfo-lyase subunit alpha. | 0.418 |
CTQ69447.1 | suyB | LAX5112_02117 | LAX5112_02109 | Hypothetical protein. | (2R)-sulfolactate sulfo-lyase subunit beta precursor. | 0.409 |
CTQ69447.1 | yjjN_1 | LAX5112_02117 | LAX5112_02111 | Hypothetical protein. | Putative L-galactonate oxidoreductase. | 0.421 |
CTQ77667.1 | dctP_5 | LAX5112_05005 | LAX5112_02116 | TRAP-type C4-dicarboxylate transport system, small permease component. | C4-dicarboxylate-binding periplasmic protein precursor. | 0.703 |
CTQ77667.1 | gno | LAX5112_05005 | LAX5112_02112 | TRAP-type C4-dicarboxylate transport system, small permease component. | Gluconate 5-dehydrogenase. | 0.483 |
CTQ77667.1 | siaT_15 | LAX5112_05005 | LAX5112_02114 | TRAP-type C4-dicarboxylate transport system, small permease component. | Neu5Ac permease. | 0.636 |
CTQ77667.1 | yjjN_1 | LAX5112_05005 | LAX5112_02111 | TRAP-type C4-dicarboxylate transport system, small permease component. | Putative L-galactonate oxidoreductase. | 0.478 |
dctP_5 | CTQ69447.1 | LAX5112_02116 | LAX5112_02117 | C4-dicarboxylate-binding periplasmic protein precursor. | Hypothetical protein. | 0.639 |
dctP_5 | CTQ77667.1 | LAX5112_02116 | LAX5112_05005 | C4-dicarboxylate-binding periplasmic protein precursor. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.703 |
dctP_5 | degA_1 | LAX5112_02116 | LAX5112_02118 | C4-dicarboxylate-binding periplasmic protein precursor. | Degradation activator. | 0.736 |
dctP_5 | gno | LAX5112_02116 | LAX5112_02112 | C4-dicarboxylate-binding periplasmic protein precursor. | Gluconate 5-dehydrogenase. | 0.818 |
dctP_5 | hpsN | LAX5112_02116 | LAX5112_02113 | C4-dicarboxylate-binding periplasmic protein precursor. | Sulfopropanediol 3-dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.621 |
dctP_5 | siaT_15 | LAX5112_02116 | LAX5112_02114 | C4-dicarboxylate-binding periplasmic protein precursor. | Neu5Ac permease. | 0.887 |
dctP_5 | siaT_16 | LAX5112_02116 | LAX5112_02115 | C4-dicarboxylate-binding periplasmic protein precursor. | Neu5Ac permease. | 0.910 |
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