STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnSPutative 2-aminoethylphosphonate-binding periplasmic protein precursor. (331 aa)    
Predicted Functional Partners:
modB_2
Molybdenum transport system permease protein ModB.
 
  
  0.984
cysW_2
Sulfate transport system permease protein CysW.
 
  
  0.976
cpdA_2
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
     0.895
potA_2
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
 
 
 0.888
modB_3
Molybdenum transport system permease protein ModB.
 
 
 0.885
CTQ77018.1
Hypothetical protein.
   
 
  0.846
degA_2
Degradation activator.
 
     0.822
phnV
Putative 2-aminoethylphosphonate transport system permease protein PhnV.
  
 
 0.814
ydcV_5
Inner membrane ABC transporter permease protein YdcV.
    
  0.763
CTQ66394.1
Phosphoglycerate transporter family protein.
  
  
 0.705
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.