STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ70098.1Invasion protein B, involved in pathogenesis. (183 aa)    
Predicted Functional Partners:
CTQ67645.1
Zinc-finger domain protein.
  
     0.773
CTQ67583.1
Hypothetical protein.
  
     0.771
CTQ64051.1
Sel1 repeat.
  
     0.765
CTQ72010.1
Hypothetical protein.
  
     0.763
CTQ72574.1
Flagellar biosynthesis chaperone.
  
     0.761
CTQ72306.1
Putative integral membrane protein.
  
     0.758
CTQ70326.1
Hypothetical protein.
  
     0.753
CTQ66965.1
Hypothetical protein.
  
     0.731
CTQ73576.1
Putative small protein.
  
     0.730
CTQ67621.1
Hypothetical protein.
  
     0.722
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.