STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ70158.1Hypothetical protein. (355 aa)    
Predicted Functional Partners:
CTQ74842.1
Hypothetical protein.
 
 
 
 0.922
glnK
Nitrogen regulatory protein P-II 2; Belongs to the P(II) protein family.
   
 
 0.723
glnB
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
   
 
 0.723
nhaR
Na(+)/H(+) antiporter regulatory protein; Belongs to the LysR transcriptional regulatory family.
       0.533
mhqR_4
HTH-type transcriptional regulator MhqR.
       0.497
CTQ70162.1
Nicotinamidase/pyrazinamidase.
       0.463
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.