STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltSGlutamate permease; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. (406 aa)    
Predicted Functional Partners:
CTQ70280.1
Hypothetical protein.
       0.661
glyS
Glycine--tRNA ligase beta subunit.
       0.566
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
 
     0.529
yiaW_2
Inner membrane protein YiaW.
  
     0.521
CTQ73039.1
Acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase.
 
     0.482
CTQ77542.1
Hypothetical protein.
  
     0.476
yibH_1
Inner membrane protein YibH.
 
     0.472
CTQ72037.1
Putative inner membrane protein.
  
     0.469
yiaV_5
Inner membrane protein YiaV precursor.
 
     0.462
CTQ72086.1
Hypothetical protein.
  
     0.460
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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