Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTQ70911.1 | CTQ70917.1 | LAX5112_02650 | LAX5112_02652 | Hypothetical protein. | Putative DMT superfamily transporter inner membrane protein. | 0.440 |
CTQ70911.1 | pdxJ | LAX5112_02650 | LAX5112_02651 | Hypothetical protein. | Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.791 |
CTQ70911.1 | rhtB_4 | LAX5112_02650 | LAX5112_02649 | Hypothetical protein. | Homoserine/homoserine lactone efflux protein. | 0.632 |
CTQ70911.1 | surE | LAX5112_02650 | LAX5112_00178 | Hypothetical protein. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.467 |
CTQ70911.1 | yfkN_4 | LAX5112_02650 | LAX5112_03635 | Hypothetical protein. | Trifunctional nucleotide phosphoesterase protein YfkN precursor. | 0.573 |
CTQ70917.1 | CTQ70911.1 | LAX5112_02652 | LAX5112_02650 | Putative DMT superfamily transporter inner membrane protein. | Hypothetical protein. | 0.440 |
CTQ70917.1 | pdxJ | LAX5112_02652 | LAX5112_02651 | Putative DMT superfamily transporter inner membrane protein. | Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.440 |
pdxJ | CTQ70911.1 | LAX5112_02651 | LAX5112_02650 | Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | Hypothetical protein. | 0.791 |
pdxJ | CTQ70917.1 | LAX5112_02651 | LAX5112_02652 | Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | Putative DMT superfamily transporter inner membrane protein. | 0.440 |
pdxJ | rhtB_4 | LAX5112_02651 | LAX5112_02649 | Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | Homoserine/homoserine lactone efflux protein. | 0.632 |
rhtB_4 | CTQ70911.1 | LAX5112_02649 | LAX5112_02650 | Homoserine/homoserine lactone efflux protein. | Hypothetical protein. | 0.632 |
rhtB_4 | pdxJ | LAX5112_02649 | LAX5112_02651 | Homoserine/homoserine lactone efflux protein. | Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.632 |
surE | CTQ70911.1 | LAX5112_00178 | LAX5112_02650 | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | Hypothetical protein. | 0.467 |
surE | yfkN_4 | LAX5112_00178 | LAX5112_03635 | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | Trifunctional nucleotide phosphoesterase protein YfkN precursor. | 0.791 |
yfkN_4 | CTQ70911.1 | LAX5112_03635 | LAX5112_02650 | Trifunctional nucleotide phosphoesterase protein YfkN precursor. | Hypothetical protein. | 0.573 |
yfkN_4 | surE | LAX5112_03635 | LAX5112_00178 | Trifunctional nucleotide phosphoesterase protein YfkN precursor. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.791 |