STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ73358.1Hypothetical protein. (515 aa)    
Predicted Functional Partners:
ecsA
ABC-type transporter ATP-binding protein EcsA.
 
     0.921
CTQ67372.1
Hypothetical protein.
  
     0.748
CTQ67262.1
Flagellar hook-length control protein FliK.
  
     0.718
CTQ67384.1
Hypothetical protein.
  
     0.702
CTQ68198.1
Hypothetical protein.
  
     0.684
CTQ67197.1
LexA repressor; Belongs to the peptidase S24 family.
  
     0.672
CTQ72579.1
Hypothetical protein.
  
     0.672
CTQ72739.1
Hypothetical protein.
  
     0.670
CTQ74088.1
Hypothetical protein.
  
     0.664
CTQ73044.1
Putative protein with protein kinase and helix-hairpin-helix DNA-binding domains.
 
     0.610
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.