STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ74760.1Chromosome segregation protein SMC. (508 aa)    
Predicted Functional Partners:
CTQ74757.1
Heme biosynthesis-associated TPR protein.
 
   
 0.868
CTQ73691.1
Hypothetical protein.
  
     0.742
CTQ74224.1
Hypothetical protein.
  
     0.726
CTQ77642.1
Chromosome segregation protein SMC.
  
   
 0.719
CTQ71556.1
Hypothetical protein.
 
     0.716
CTQ72874.1
Putative membrane protein.
  
     0.708
CTQ67756.1
Hypothetical protein.
  
     0.702
CTQ68969.1
Sensors of blue-light using FAD.
  
     0.700
CTQ69939.1
Hypothetical protein.
  
     0.687
CTQ67384.1
Hypothetical protein.
  
     0.683
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.