STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ74988.1Hypothetical protein. (132 aa)    
Predicted Functional Partners:
CTQ74986.1
Hypothetical protein.
 
     0.954
CTQ74990.1
Chemotactic signal-response protein CheL.
 
     0.954
CTQ74993.1
Flagellar biosynthesis protein FliR.
 
     0.874
CTQ75002.1
Flagellar biosynthesis regulatory protein FlaF.
 
     0.860
CTQ75000.1
Flagellar biosynthesis repressor FlbT.
 
     0.854
CTQ75004.1
Flagellar hook-associated protein FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
     0.852
flgK
Flagellar hook-associated protein 1.
 
     0.840
CTQ75016.1
Chemotaxis protein.
 
     0.815
CTQ75013.1
Flagellar hook-length control protein FliK.
 
     0.812
lafU
Chemotaxis protein LafU.
 
     0.804
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.