Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTQ75315.1 | CTQ75317.1 | LAX5112_04182 | LAX5112_04183 | Hypothetical protein. | Putative NUDIX hydrolase. | 0.809 |
CTQ75315.1 | CTQ75320.1 | LAX5112_04182 | LAX5112_04184 | Hypothetical protein. | Hypothetical protein. | 0.712 |
CTQ75315.1 | cca | LAX5112_04182 | LAX5112_04181 | Hypothetical protein. | CCA-adding enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.808 |
CTQ75317.1 | CTQ75315.1 | LAX5112_04183 | LAX5112_04182 | Putative NUDIX hydrolase. | Hypothetical protein. | 0.809 |
CTQ75317.1 | CTQ75320.1 | LAX5112_04183 | LAX5112_04184 | Putative NUDIX hydrolase. | Hypothetical protein. | 0.715 |
CTQ75317.1 | cca | LAX5112_04183 | LAX5112_04181 | Putative NUDIX hydrolase. | CCA-adding enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.876 |
CTQ75317.1 | cya_1 | LAX5112_04183 | LAX5112_02244 | Putative NUDIX hydrolase. | Adenylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | 0.650 |
CTQ75317.1 | dapF | LAX5112_04183 | LAX5112_02006 | Putative NUDIX hydrolase. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.689 |
CTQ75317.1 | nadE | LAX5112_04183 | LAX5112_00953 | Putative NUDIX hydrolase. | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.697 |
CTQ75317.1 | nnr | LAX5112_04183 | LAX5112_03519 | Putative NUDIX hydrolase. | Nicotinamide nucleotide repair protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the [...] | 0.978 |
CTQ75317.1 | ribBA | LAX5112_04183 | LAX5112_02490 | Putative NUDIX hydrolase. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.747 |
CTQ75317.1 | rnr | LAX5112_04183 | LAX5112_01860 | Putative NUDIX hydrolase. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.743 |
CTQ75317.1 | rph | LAX5112_04183 | LAX5112_04819 | Putative NUDIX hydrolase. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.659 |
CTQ75320.1 | CTQ75315.1 | LAX5112_04184 | LAX5112_04182 | Hypothetical protein. | Hypothetical protein. | 0.712 |
CTQ75320.1 | CTQ75317.1 | LAX5112_04184 | LAX5112_04183 | Hypothetical protein. | Putative NUDIX hydrolase. | 0.715 |
CTQ75320.1 | cca | LAX5112_04184 | LAX5112_04181 | Hypothetical protein. | CCA-adding enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.711 |
cca | CTQ75315.1 | LAX5112_04181 | LAX5112_04182 | CCA-adding enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Hypothetical protein. | 0.808 |
cca | CTQ75317.1 | LAX5112_04181 | LAX5112_04183 | CCA-adding enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Putative NUDIX hydrolase. | 0.876 |
cca | CTQ75320.1 | LAX5112_04181 | LAX5112_04184 | CCA-adding enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Hypothetical protein. | 0.711 |
cca | rnr | LAX5112_04181 | LAX5112_01860 | CCA-adding enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.599 |
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