STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmgC_6Acyl-CoA dehydrogenase. (423 aa)    
Predicted Functional Partners:
etfA
Electron transfer flavoprotein large subunit.
 0.946
fadJ_2
Fatty acid oxidation complex subunit alpha.
  
 0.929
fadJ_1
Fatty acid oxidation complex subunit alpha; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.924
fadJ_3
Fatty acid oxidation complex subunit alpha.
  
 0.924
etfB
Electron transfer flavoprotein small subunit.
 
 
 0.906
lcfB_4
Long-chain-fatty-acid--CoA ligase.
  
 
  0.809
frc_3
Formyl-coenzyme A transferase; Belongs to the CoA-transferase III family.
  
 
  0.799
aidB_3
Putative acyl-CoA dehydrogenase AidB.
 
    
0.767
mmgB
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.728
lcdH_2
L-carnitine dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
  
 0.725
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.