STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ76169.1Hypothetical protein. (146 aa)    
Predicted Functional Partners:
CTQ71959.1
2'-deoxycytidine 5'-triphosphate deaminase.
 
     0.776
CTQ76173.1
Hypothetical protein; Belongs to the UPF0262 family.
 
     0.764
arsC_4
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
     0.763
regB
Sensor histidine kinase RegB.
  
     0.753
CTQ70310.1
Hypothetical protein.
  
     0.712
hisS_1
Histidine--tRNA ligase.
  
     0.709
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
       0.707
CTQ69723.1
Hypothetical protein.
  
     0.700
regA
Response regulator PrrA.
  
     0.691
glnL_2
Nitrogen regulation protein NR(II).
  
     0.680
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.