STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ76585.1Tripartite tricarboxylate transporter TctA family protein. (651 aa)    
Predicted Functional Partners:
CTQ76588.1
Argininosuccinate lyase.
 
  
 0.970
CTQ66071.1
Tripartite tricarboxylate transporter family receptor.
 
  
 0.927
CTQ66074.1
Tripartite tricarboxylate transporter TctB family protein.
  
 
 0.877
CTQ73113.1
Hypothetical protein.
  
  
 0.727
CTQ76582.1
Hypothetical protein.
       0.645
CTQ76595.1
L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
     0.626
slcC
(S)-sulfolactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.486
allC
Allantoate amidohydrolase.
       0.421
CTQ72085.1
Membrane protein AbrB duplication.
 
    0.418
yiaM
2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.
  
     0.410
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.