STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ76741.1N-glycosyltransferase. (408 aa)    
Predicted Functional Partners:
gtaB_2
UTP--glucose-1-phosphate uridylyltransferase.
  
 
 0.880
CTQ75467.1
UDP-glucose 4-epimerase.
  
 
 0.857
uao
Uric acid degradation bifunctional protein.
  
 
 0.805
CTQ66548.1
Outer membrane N-deacetylase.
  
 
 0.804
CTQ66213.1
Capsular polysaccharide biosynthesis protein.
  
 
 0.798
CTQ66885.1
Tetratricopeptide repeat protein.
  
 
 0.795
tuaC
Putative teichuronic acid biosynthesis glycosyltransferase TuaC.
 
  
 0.782
CTQ67305.1
Putative glycosyl transferase.
  
 
 0.767
epsJ
Putative glycosyltransferase EpsJ.
    
 0.735
csbB
Putative glycosyltransferase CsbB.
  
 
 0.727
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.