Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTQ72214.1 | barA_4 | LAX5112_03100 | LAX5112_04811 | Blue-light-activated protein. | Signal transduction histidine-protein kinase BarA. | 0.999 |
CTQ72214.1 | cheA | LAX5112_03100 | LAX5112_03221 | Blue-light-activated protein. | Chemotaxis protein CheA. | 0.999 |
CTQ72214.1 | cheB | LAX5112_03100 | LAX5112_03224 | Blue-light-activated protein. | Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.968 |
CTQ72214.1 | cheR | LAX5112_03100 | LAX5112_03225 | Blue-light-activated protein. | Chemotaxis protein methyltransferase. | 0.920 |
CTQ72214.1 | cheW | LAX5112_03100 | LAX5112_03222 | Blue-light-activated protein. | Coupling protein CheW. | 0.981 |
CTQ72214.1 | cheY_2 | LAX5112_03100 | LAX5112_02323 | Blue-light-activated protein. | Chemotaxis protein CheY. | 0.996 |
CTQ72214.1 | cheY_4 | LAX5112_03100 | LAX5112_03223 | Blue-light-activated protein. | Chemotaxis protein CheY. | 0.996 |
CTQ72214.1 | luxQ_2 | LAX5112_03100 | LAX5112_03035 | Blue-light-activated protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.999 |
CTQ72214.1 | luxQ_3 | LAX5112_03100 | LAX5112_04863 | Blue-light-activated protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.999 |
CTQ72214.1 | mcp4_19 | LAX5112_03100 | LAX5112_04847 | Blue-light-activated protein. | Methyl-accepting chemotaxis protein 4. | 0.744 |
barA_4 | CTQ72214.1 | LAX5112_04811 | LAX5112_03100 | Signal transduction histidine-protein kinase BarA. | Blue-light-activated protein. | 0.999 |
barA_4 | cheA | LAX5112_04811 | LAX5112_03221 | Signal transduction histidine-protein kinase BarA. | Chemotaxis protein CheA. | 0.999 |
barA_4 | cheB | LAX5112_04811 | LAX5112_03224 | Signal transduction histidine-protein kinase BarA. | Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.967 |
barA_4 | cheR | LAX5112_04811 | LAX5112_03225 | Signal transduction histidine-protein kinase BarA. | Chemotaxis protein methyltransferase. | 0.924 |
barA_4 | cheW | LAX5112_04811 | LAX5112_03222 | Signal transduction histidine-protein kinase BarA. | Coupling protein CheW. | 0.981 |
barA_4 | cheY_2 | LAX5112_04811 | LAX5112_02323 | Signal transduction histidine-protein kinase BarA. | Chemotaxis protein CheY. | 0.997 |
barA_4 | cheY_4 | LAX5112_04811 | LAX5112_03223 | Signal transduction histidine-protein kinase BarA. | Chemotaxis protein CheY. | 0.998 |
barA_4 | luxQ_2 | LAX5112_04811 | LAX5112_03035 | Signal transduction histidine-protein kinase BarA. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.999 |
barA_4 | luxQ_3 | LAX5112_04811 | LAX5112_04863 | Signal transduction histidine-protein kinase BarA. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.999 |
barA_4 | mcp4_19 | LAX5112_04811 | LAX5112_04847 | Signal transduction histidine-protein kinase BarA. | Methyl-accepting chemotaxis protein 4. | 0.740 |
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