STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ77617.1Lysine-arginine-ornithine-binding periplasmic protein. (249 aa)    
Predicted Functional Partners:
CTQ68808.1
Bacterial extracellular solute-binding proteins, family 3.
  
     0.773
yxeM_3
Putative amino-acid-binding protein YxeM precursor.
  
     0.770
CTQ75849.1
Cystine transporter subunit.
  
     0.769
CTQ66461.1
Bacterial extracellular solute-binding proteins, family 3.
  
     0.767
CTQ64305.1
Bacterial extracellular solute-binding proteins, family 3.
  
     0.764
CTQ67666.1
Bacterial extracellular solute-binding proteins, family 3.
  
     0.759
CTQ75792.1
Bacterial extracellular solute-binding proteins, family 3.
  
     0.757
CTQ76223.1
Glutamine ABC transporter periplasmic protein.
  
     0.757
CTQ75855.1
Bacterial extracellular solute-binding proteins, family 3.
  
     0.748
CTQ64006.1
Hypothetical protein.
  
     0.747
Your Current Organism:
Labrenzia alexandrii
NCBI taxonomy Id: 388408
Other names: DSM 17067, L. alexandrii, Labrenzia alexandrii Biebl et al. 2007, NCIMB 14079, strain DFL-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.