STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ81669.1Lipoprotein. (203 aa)    
Predicted Functional Partners:
EAZ82216.1
ABC transporter, ATP-binding protein.
  
 
 0.994
EAZ81232.2
Hypothetical protein.
 
 
 0.980
EAZ83015.1
Membrane protein.
 
 
 0.918
EAZ79530.1
Membrane protein.
 
 
 0.898
EAZ81667.1
CBS domain protein.
       0.747
EAZ81668.1
Hypothetical protein.
       0.746
EAZ79760.1
Outer membrane protein.
  
  
 0.718
EAZ83253.1
Hypothetical protein.
  
     0.694
EAZ81671.1
Hypothetical protein.
 
     0.693
EAZ79891.1
Lipoprotein.
  
     0.692
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.