STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ81763.1Probable 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase. (281 aa)    
Predicted Functional Partners:
EAZ82317.1
NADP-dependent fatty aldehyde dehydrogenase.
 
 
 0.853
EAZ80953.1
Dihydrodipicolinate synthase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. Belongs to the DapA family.
    
  0.798
EAZ81762.1
TrmH family RNA methyltransferase.
       0.773
EAZ81322.1
Putative dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
  
 0.699
EAZ79378.1
Putative mandelate racemase/muconate lactonizing enzyme protein.
 
  
 0.613
EAZ79380.1
Starvation sensing protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.585
EAZ81761.1
Hypothetical protein.
       0.580
EAZ80444.1
Gluconolactonase.
 
     0.484
EAZ80448.2
Nipsnap superfamily protein.
  
     0.462
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
    
 0.443
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.