STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ81776.1NAD-dependent epimerase/dehydratase family protein. (296 aa)    
Predicted Functional Partners:
EAZ81709.1
Outer membrane lipoprotein blc; Belongs to the calycin superfamily. Lipocalin family.
      0.908
EAZ79321.1
Helix-loop-helix' dimerization domain signature protein.
 
    0.724
EAZ79341.1
General stress protein.
   
    0.703
EAZ79947.1
Photolyase protein.
      0.551
EAZ80093.1
Arginine deiminase.
   
    0.541
EAZ81343.1
Hypothetical protein.
   
    0.541
EAZ81777.1
Voltage-gated chloride channel family protein.
  
    0.538
EAZ82308.1
3-demethylubiquinone-9 3-methyltransferase domain protein.
   
    0.517
EAZ82558.1
Hypothetical protein.
  
    0.451
EAZ79903.1
Acetyltransferase, GNAT family.
  
    0.451
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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