STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ81967.1Endo-1,4-beta-xylanase D; Belongs to the glycosyl hydrolase 43 family. (319 aa)    
Predicted Functional Partners:
EAZ81978.1
Glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
    
0.924
EAZ81981.1
Glycosyl hydrolase, family 2; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.829
EAZ82939.1
Arabinan endo-1,5-alpha-L-arabinosidase.
     0.745
EAZ81973.2
Two-component system sensor histidine kinase/response regulator, hybrid (one-component system).
 
  
  0.670
EAZ79842.1
Putative beta-glucanase; Belongs to the glycosyl hydrolase 43 family.
  
     0.656
EAZ81979.2
Hypothetical protein.
 
     0.626
EAZ79653.1
Putative outer membrane protein.
  
  
  0.564
EAZ79329.1
Hypothetical protein.
  
 
  0.560
EAZ81976.1
Putative outer membrane protein.
  
  
  0.555
EAZ81980.1
Glycosyl hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
 
0.552
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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