STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ81975.2TonB-dependent receptor outer membrane protein. (1040 aa)    
Predicted Functional Partners:
EAZ81976.1
Putative outer membrane protein.
 
 
   0.947
EAZ81977.1
Hypothetical protein.
 
     0.916
EAZ79653.1
Putative outer membrane protein.
  
 
   0.828
EAZ81979.2
Hypothetical protein.
 
     0.797
EAZ79711.1
Putative outer membrane protein.
  
 
   0.792
EAZ81856.1
Putative outer membrane protein probably involved in nutrient binding.
 
 
   0.779
EAZ79654.2
Hypothetical protein.
 
     0.776
EAZ82114.2
Putative outer membrane protein probably involved in nutrient binding.
 
 
   0.771
EAZ80011.1
Lipoprotein.
  
 
   0.729
EAZ81973.2
Two-component system sensor histidine kinase/response regulator, hybrid (one-component system).
  
     0.695
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.