STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ81978.1Glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family. (322 aa)    
Predicted Functional Partners:
EAZ81967.1
Endo-1,4-beta-xylanase D; Belongs to the glycosyl hydrolase 43 family.
    
0.924
EAZ81981.1
Glycosyl hydrolase, family 2; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.814
EAZ79329.1
Hypothetical protein.
  
 
  0.584
EAZ81980.1
Glycosyl hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
 
    
0.572
EAZ81979.2
Hypothetical protein.
 
     0.571
EAZ80533.1
Glycosyl hydrolase, family 10.
 
  
 0.557
EAZ81032.1
Putative carbohydrate esterase, Family 12, YesT.
  
  
  0.557
EAZ80502.1
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.501
EAZ82498.1
Putative rhamnogalacturonan acetylesterase.
 
  
  0.483
EAZ81977.1
Hypothetical protein.
       0.463
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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