Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAZ79595.1 | EAZ82019.1 | ALPR1_08223 | ALPR1_02220 | ABC transporter, permease component. | Endoribonuclease. | 0.425 |
EAZ80098.1 | EAZ82019.1 | ALPR1_15754 | ALPR1_02220 | Phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase. | Endoribonuclease. | 0.767 |
EAZ80098.1 | aroC | ALPR1_15754 | ALPR1_02795 | Phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.994 |
EAZ80410.1 | EAZ82014.1 | ALPR1_05790 | ALPR1_02195 | NAD dependent epimerase/dehydratase family protein. | Hypothetical protein. | 0.589 |
EAZ80410.1 | EAZ82019.1 | ALPR1_05790 | ALPR1_02220 | NAD dependent epimerase/dehydratase family protein. | Endoribonuclease. | 0.418 |
EAZ80410.1 | EAZ83150.1 | ALPR1_05790 | ALPR1_13055 | NAD dependent epimerase/dehydratase family protein. | Hypothetical protein. | 0.597 |
EAZ80410.1 | fusA | ALPR1_05790 | ALPR1_19628 | NAD dependent epimerase/dehydratase family protein. | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] | 0.619 |
EAZ82014.1 | EAZ80410.1 | ALPR1_02195 | ALPR1_05790 | Hypothetical protein. | NAD dependent epimerase/dehydratase family protein. | 0.589 |
EAZ82014.1 | EAZ82019.1 | ALPR1_02195 | ALPR1_02220 | Hypothetical protein. | Endoribonuclease. | 0.498 |
EAZ82018.1 | EAZ82019.1 | ALPR1_02215 | ALPR1_02220 | Sensor histidine kinase. | Endoribonuclease. | 0.588 |
EAZ82019.1 | EAZ79595.1 | ALPR1_02220 | ALPR1_08223 | Endoribonuclease. | ABC transporter, permease component. | 0.425 |
EAZ82019.1 | EAZ80098.1 | ALPR1_02220 | ALPR1_15754 | Endoribonuclease. | Phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase. | 0.767 |
EAZ82019.1 | EAZ80410.1 | ALPR1_02220 | ALPR1_05790 | Endoribonuclease. | NAD dependent epimerase/dehydratase family protein. | 0.418 |
EAZ82019.1 | EAZ82014.1 | ALPR1_02220 | ALPR1_02195 | Endoribonuclease. | Hypothetical protein. | 0.498 |
EAZ82019.1 | EAZ82018.1 | ALPR1_02220 | ALPR1_02215 | Endoribonuclease. | Sensor histidine kinase. | 0.588 |
EAZ82019.1 | EAZ83150.1 | ALPR1_02220 | ALPR1_13055 | Endoribonuclease. | Hypothetical protein. | 0.408 |
EAZ82019.1 | aroC | ALPR1_02220 | ALPR1_02795 | Endoribonuclease. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.519 |
EAZ82019.1 | fusA | ALPR1_02220 | ALPR1_19628 | Endoribonuclease. | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] | 0.535 |
EAZ83150.1 | EAZ80410.1 | ALPR1_13055 | ALPR1_05790 | Hypothetical protein. | NAD dependent epimerase/dehydratase family protein. | 0.597 |
EAZ83150.1 | EAZ82019.1 | ALPR1_13055 | ALPR1_02220 | Hypothetical protein. | Endoribonuclease. | 0.408 |
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