STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ82066.1Bacteroidetes-specific membrane protein. (347 aa)    
Predicted Functional Partners:
EAZ82067.1
Putative PKD domain protein.
 
     0.825
EAZ80076.1
Hypothetical protein.
  
     0.762
EAZ81463.1
Gliding motility-related protein TPR repeat-containing protein.
  
     0.761
EAZ81470.1
Bacteroidetes-specific membrane protein.
  
     0.761
EAZ80193.1
Hypothetical protein.
  
     0.747
EAZ79490.1
Hypothetical protein.
  
     0.739
EAZ80326.1
Hypothetical protein.
  
     0.738
EAZ80198.1
Transcriptional regulator.
  
     0.738
EAZ79257.1
Hypothetical protein.
  
     0.731
EAZ81136.1
Hypothetical protein.
  
     0.719
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.