STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ82252.1Putative alpha-L-fucosidase. (448 aa)    
Predicted Functional Partners:
EAZ79190.1
hydroxymethylglutaryl-CoA lyase like protein.
 
      0.758
EAZ79565.1
Fibronectin type III domain protein.
  
 
  0.737
EAZ82157.1
alpha-L-fucosidase 1.
  
 
0.680
EAZ79726.1
alpha-L-fucosidase 2.
  
 
  0.650
EAZ79914.1
Putative exported hydrolase.
  
  
 
0.635
EAZ80799.1
Hypothetical protein.
  
 
0.544
EAZ79357.1
Hypothetical protein.
 
   
 0.541
rpsU
Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
       0.528
EAZ82485.1
Beta-hexosaminidase.
   
 0.475
EAZ79860.1
Amidohydrolase 2.
 
     0.468
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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