STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ82257.1Dolichyl-phosphate-mannose-protein mannosyltransferase. (558 aa)    
Predicted Functional Partners:
EAZ82258.1
Glyoxalase family protein.
 
 
  0.883
EAZ82259.1
Membrane protein.
 
    0.699
EAZ82431.1
Glycosyl transferase, group 2 family.
 
 
  0.685
EAZ80369.2
Hypothetical protein.
  
     0.663
EAZ80245.1
Glycosyl transferase, group 2 family; Overlaps another CDS with the same product name.
 
 
  0.638
EFQ79279.1
Hypothetical protein.
  
     0.631
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
  
  
  0.621
EAZ82714.1
Ion channel superfamily.
  
     0.585
EAZ79473.1
3-deoxy-D-manno-octulosonic-acid transferase, glycosyltransferase family 30 protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
  
  
  0.573
EAZ82851.1
Hypothetical protein.
  
     0.505
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.