Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAZ79067.1 | EAZ79401.1 | ALPR1_13709 | ALPR1_17173 | Transketolase. | NADP-dependent malic enzyme. | 0.978 |
EAZ79067.1 | EAZ79408.1 | ALPR1_13709 | ALPR1_04178 | Transketolase. | Oxoglutarate dehydrogenase (succinyl-transferring), E1 component. | 0.921 |
EAZ79067.1 | EAZ79409.1 | ALPR1_13709 | ALPR1_04183 | Transketolase. | Dihydrolipoyllysine-residue succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.999 |
EAZ79067.1 | EAZ79411.1 | ALPR1_13709 | ALPR1_04193 | Transketolase. | Dihydrolipoyl dehydrogenase. | 0.999 |
EAZ79067.1 | EAZ80605.1 | ALPR1_13709 | ALPR1_06765 | Transketolase. | Pyruvate dehydrogenase complex, E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.909 |
EAZ79067.1 | EAZ81129.1 | ALPR1_13709 | ALPR1_18873 | Transketolase. | Dihydrolipoyl dehydrogenase. | 0.999 |
EAZ79067.1 | EAZ81204.1 | ALPR1_13709 | ALPR1_19248 | Transketolase. | 2-oxoisovalerate dehydrogenase E1 component, beta subunit. | 0.999 |
EAZ79067.1 | pdhA | ALPR1_13709 | ALPR1_02835 | Transketolase. | Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.968 |
EAZ79067.1 | sucC | ALPR1_13709 | ALPR1_10310 | Transketolase. | succinyl-CoA synthase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.656 |
EAZ79067.1 | sucD | ALPR1_13709 | ALPR1_18328 | Transketolase. | succinyl-CoA synthase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.443 |
EAZ79401.1 | EAZ79067.1 | ALPR1_17173 | ALPR1_13709 | NADP-dependent malic enzyme. | Transketolase. | 0.978 |
EAZ79401.1 | EAZ79408.1 | ALPR1_17173 | ALPR1_04178 | NADP-dependent malic enzyme. | Oxoglutarate dehydrogenase (succinyl-transferring), E1 component. | 0.502 |
EAZ79401.1 | EAZ79409.1 | ALPR1_17173 | ALPR1_04183 | NADP-dependent malic enzyme. | Dihydrolipoyllysine-residue succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.916 |
EAZ79401.1 | EAZ79411.1 | ALPR1_17173 | ALPR1_04193 | NADP-dependent malic enzyme. | Dihydrolipoyl dehydrogenase. | 0.692 |
EAZ79401.1 | EAZ80605.1 | ALPR1_17173 | ALPR1_06765 | NADP-dependent malic enzyme. | Pyruvate dehydrogenase complex, E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.921 |
EAZ79401.1 | EAZ81129.1 | ALPR1_17173 | ALPR1_18873 | NADP-dependent malic enzyme. | Dihydrolipoyl dehydrogenase. | 0.692 |
EAZ79401.1 | EAZ81204.1 | ALPR1_17173 | ALPR1_19248 | NADP-dependent malic enzyme. | 2-oxoisovalerate dehydrogenase E1 component, beta subunit. | 0.978 |
EAZ79401.1 | pdhA | ALPR1_17173 | ALPR1_02835 | NADP-dependent malic enzyme. | Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.900 |
EAZ79401.1 | sucC | ALPR1_17173 | ALPR1_10310 | NADP-dependent malic enzyme. | succinyl-CoA synthase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.912 |
EAZ79401.1 | sucD | ALPR1_17173 | ALPR1_18328 | NADP-dependent malic enzyme. | succinyl-CoA synthase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.892 |
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