STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ79453.1Transporter, small conductance mechanosensitive ion channel (MscS) family. (297 aa)    
Predicted Functional Partners:
EAZ79452.1
6-O-methylguanine DNA methyltransferase, DNA binding domain subfamily.
       0.775
EAZ81590.1
Transporter, small conductance mechanosensitive ion channel (MscS) family.
  
     0.718
EAZ82791.1
Transporter, small conductance mechanosensitive ion channel (MscS) family.
  
     0.683
EAZ79454.1
Putative oxidoreductase, short chain dehydrogenase/reductase family.
       0.572
EAZ80426.1
Putative MscS Mechanosensitive ion channel.
  
     0.566
EAZ79455.2
Hypothetical protein.
       0.561
EAZ79456.1
Hypothetical protein.
       0.561
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
    0.424
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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