STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ79556.1Hypothetical protein. (198 aa)    
Predicted Functional Partners:
EAZ79555.1
Probable secreted glycosyl hydrolase.
     0.994
EAZ81149.1
Probable secreted glycosyl hydrolase.
 
     0.966
EAZ80964.1
Probable NADH-dependent dehydrogenase.
  
     0.730
EAZ79686.2
Probable NADH-dependent dehydrogenase.
  
     0.728
EAZ80373.1
Putative dehydrogenase.
  
     0.701
EAZ79161.1
Putative oxidoreductase family, NAD-binding Rossmann fold protein.
  
     0.701
EAZ81340.1
Putative Tat (twin-arginine translocation) pathway signal sequence containing protein.
  
     0.682
EAZ82777.1
Probable NADH-dependent dehydrogenase.
  
     0.681
EAZ82624.1
Dehydrogenase.
  
     0.677
EAZ79162.1
Putative multi-domain protein.
  
     0.672
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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