STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ80270.1ABC transporter, permease/ATP-binding protein. (590 aa)    
Predicted Functional Partners:
EAZ81482.2
ABC transporter, permease/ATP-binding protein, MDR family.
  
  
 
0.838
truA-2
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
     0.832
EAZ79866.1
Lipid A export ATP-binding/permease protein MsbA.
 
 
 
0.781
EAZ82874.1
Toxin secretion ABC transporter ATP-binding protein.
 
 
 
0.757
EAZ82980.1
Putative bacitracin synthetase 3.
 
 0.736
EAZ80268.1
Hypothetical protein.
       0.695
EAZ80269.1
Hypothetical protein.
       0.671
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.591
EAZ79993.1
ABC transporter, ATP-binding protein.
  
 
  0.575
EAZ80272.1
Lipoprotein.
       0.547
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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